Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14555 and 14556 are separated by 172 nucleotides14556 and 14557 are separated by 209 nucleotides14557 and 14558 are separated by 558 nucleotides14558 and 14559 are separated by 772 nucleotides mRNA_6187: 14555 - BLAST Cytoplasmic dynein 1 intermediate chain 1 [Wallem..., at 208,221 to 211,423 14555 mRNA_6188: 14556 - Hypothetical Protein, at 211,596 to 212,147 14556 mRNA_6189: 14557 - ProSiteProfiles-Tyrosine specific protein phosphatases family profile.-PS50056,SUPERFAMILY--SSF52799, at 212,357 to 214,481 14557 mRNA_6190: 14558 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 215,040 to 217,246 14558 mRNA_6191: 14559 - K01485 codA cytosine deaminase, at 218,019 to 218,832 14559
Group Condition mRNA_6187 mRNA_6188 mRNA_6189 mRNA_6190 mRNA_6191
14555 14556 14557 14558 14559
growth on oleic acid YNB Glucose -0.2 -0.1 -0.2 -0.6 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.2 -0.1 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.2 -0.1 -0.2 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 -0.2 -0.4 +0.0
growth on oleic acid YNB Oleic Acid -0.4 +0.0 -0.1 -0.5 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.1 +0.2 -0.3 -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.0 +0.2 -0.0 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.1 +0.1 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.0 -0.1 -0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.0 +0.0 -0.2 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 +0.1 -0.4 -0.5
growth on ypd YPD -0.4 -0.1 +0.3 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.2 +0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 +0.0 -0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.1 +0.3 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.0 +0.2 +0.1 -0.1
auxotrophy YNB Glucose -0.2 -0.3 +0.2 -0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 +0.0 -0.2 +0.3
auxotrophy Dropout Complete +0.0 +0.1 +0.0 -0.3 +0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.1 +0.3 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.3 +0.5 +0.0 -0.2
remove
mRNA_6187
plot
remove
mRNA_6188
plot
remove
mRNA_6189
remove
mRNA_6190
plot
remove
mRNA_6191
plot