Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14561 and 14562 are separated by 135 nucleotides14562 and 14563 are separated by 177 nucleotides14563 and 14564 are separated by 452 nucleotides14564 and 14565 are separated by 134 nucleotides mRNA_6193: 14561 - Hypothetical Protein, at 221,060 to 222,668 14561 mRNA_6194: 14562 - SUPERFAMILY--SSF56112, at 222,804 to 223,699 14562 mRNA_6195: 14563 - SUPERFAMILY--SSF52047, at 223,877 to 225,110 14563 mRNA_6196: 14564 - Hypothetical Protein, at 225,563 to 227,023 14564 mRNA_6197: 14565 - K01885 EARS, gltX glutamyl-tRNA synthetase, at 227,158 to 229,573 14565
Group Condition mRNA_6193 mRNA_6194 mRNA_6195 mRNA_6196 mRNA_6197
14561 14562 14563 14564 14565
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.3 -0.1 -1.8 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 -0.6 -0.9 N.D.
growth on oleic acid YNB Glucose -0.2 +0.3 -0.2 -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 -0.1 -0.2 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.2 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.2 +0.6 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.3 +0.5 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 +0.5 -0.2 N.D.
auxotrophy Dropout Complete -0.4 +0.2 +0.6 -0.1 N.D.
auxotrophy YNB Glucose -0.6 +0.6 +1.0 -0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 +0.2 +1.2 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 +0.3 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 +0.4 -0.4 N.D.
growth on ypd YPD -0.2 +0.1 +0.8 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 +0.9 -0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.4 +0.5 +1.2 -0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 +0.3 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.6 +1.0 -0.5 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.4 +0.4 +0.8 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.4 +1.0 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.7 +0.5 -0.1 N.D.
remove
mRNA_6193
plot
remove
mRNA_6194
plot
remove
mRNA_6195
remove
mRNA_6196
plot
remove
mRNA_6197
plot