Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14563 and 14564 are separated by 452 nucleotides
14564 and 14565 are separated by 134 nucleotides
14565 and 14566 overlap by 2 nucleotides
14566 and 14567 are separated by 229 nucleotides
mRNA_6195: 14563 - SUPERFAMILY--SSF52047, at 223,877 to 225,110
14563
mRNA_6196: 14564 - Hypothetical Protein, at 225,563 to 227,023
14564
mRNA_6197: 14565 - K01885 EARS, gltX glutamyl-tRNA synthetase, at 227,158 to 229,573
14565
mRNA_6198: 14566 - BLAST tyrosine kinase domain protein [Rhizoctonia solani AG..., at 229,572 to 230,681
14566
mRNA_6199: 14567 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 230,911 to 232,731
14567
Group
Condition
mRNA
_6195
mRNA
_6196
mRNA
_6197
mRNA
_6198
mRNA
_6199
14563
14564
14565
14566
14567
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-1.8
N.D.
+0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.2
-0.4
N.D.
-0.6
-2.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
-0.3
N.D.
-0.0
-2.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.9
N.D.
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
-0.2
N.D.
-1.3
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
N.D.
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.4
N.D.
-0.7
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
N.D.
-0.2
-0.3
growth on oleic acid
YNB Glucose
-0.2
-0.4
N.D.
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.0
-0.5
N.D.
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
-0.2
N.D.
-0.4
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.5
-0.1
N.D.
+0.1
-0.1
growth on ypd
YPD
+0.8
-0.1
N.D.
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.8
N.D.
-0.5
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.3
+0.5
N.D.
-0.0
-0.0
auxotrophy
YNB Glucose
+1.0
-0.6
N.D.
+0.2
+0.2
growth on ricinoleic acid
YNB Glucose
+1.2
-0.5
N.D.
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.6
N.D.
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.9
-0.3
N.D.
+0.2
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+1.0
+0.1
N.D.
+0.2
+0.5
auxotrophy
Dropout Complete
+0.6
-0.1
N.D.
+0.8
+0.4
remove
mRNA_6195
plot
remove
mRNA_6196
plot
remove
mRNA_6197
remove
mRNA_6198
plot
remove
mRNA_6199
plot