Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14564 and 14565 are separated by 134 nucleotides14565 and 14566 overlap by 2 nucleotides14566 and 14567 are separated by 229 nucleotides14567 and 14568 are separated by 405 nucleotides mRNA_6196: 14564 - Hypothetical Protein, at 225,563 to 227,023 14564 mRNA_6197: 14565 - K01885 EARS, gltX glutamyl-tRNA synthetase, at 227,158 to 229,573 14565 mRNA_6198: 14566 - BLAST tyrosine kinase domain protein [Rhizoctonia solani AG..., at 229,572 to 230,681 14566 mRNA_6199: 14567 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 230,911 to 232,731 14567 mRNA_6200: 14568 - Hypothetical Protein, at 233,137 to 235,524 14568
Group Condition mRNA_6196 mRNA_6197 mRNA_6198 mRNA_6199 mRNA_6200
14564 14565 14566 14567 14568
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. -0.6 -2.0 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 N.D. +0.1 -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. -0.0 -2.0 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. -1.3 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. -0.7 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. -0.6 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.4 +0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.9 N.D. +0.3 -0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.2 -0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.2 +0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.5 N.D. +0.1 +0.2 +0.0
growth on ypd YPD -0.1 N.D. -0.1 -0.0 +0.1
auxotrophy YNB Glucose -0.6 N.D. +0.2 +0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. +0.1 -0.1 +0.1
growth on oleic acid YNB Glucose -0.4 N.D. +0.1 +0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 N.D. -0.5 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 N.D. +0.2 +0.2 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.6 N.D. +0.1 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. +0.2 +0.5 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.5 N.D. -0.0 -0.0 +0.5
auxotrophy Dropout Complete -0.1 N.D. +0.8 +0.4 -0.1
remove
mRNA_6196
plot
remove
mRNA_6197
plot
remove
mRNA_6198
remove
mRNA_6199
plot
remove
mRNA_6200
plot