Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14567 and 14568 are separated by 405 nucleotides14568 and 14569 are separated by 951 nucleotides14569 and 14570 are separated by 353 nucleotides14570 and 14571 are separated by 317 nucleotides mRNA_6199: 14567 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 230,911 to 232,731 14567 mRNA_6200: 14568 - Hypothetical Protein, at 233,137 to 235,524 14568 mRNA_6201: 14569 - Hypothetical Protein, at 236,476 to 237,020 14569 mRNA_6202: 14570 - KOG4475 FOG Immunoglobin and related proteins, at 237,374 to 240,451 14570 mRNA_6203: 14571 - HMMPfam-HbrB-like-PF08539, at 240,769 to 243,130 14571
Group Condition mRNA_6199 mRNA_6200 mRNA_6201 mRNA_6202 mRNA_6203
14567 14568 14569 14570 14571
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.2 +0.1 -0.5 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 +0.1 -0.1 +0.1
growth on ypd YPD -0.0 +0.1 -0.1 +0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.0 +0.0 -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 -0.1 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.3 +0.1 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -2.0 +0.6 +0.5 +0.7 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 +0.0 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 +0.0 -0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.2 +0.3 +0.6 -0.4
growth on oleic acid YNB Glucose +0.2 +0.0 +0.1 +0.1 -0.5
auxotrophy Dropout Complete +0.4 -0.1 +0.1 +0.5 -0.6
auxotrophy YNB Glucose +0.2 +0.0 +0.1 +0.5 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 +0.4 -0.5 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.2 +0.2 +0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -2.0 +0.6 +0.8 +1.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.4 +0.3 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.1 +0.1 +0.3 -0.2
growth on ricinoleic acid YNB Glucose +0.2 +0.0 +0.4 +0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.3 +0.1 +0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.5 +0.2 +0.4 -0.0
remove
mRNA_6199
plot
remove
mRNA_6200
plot
remove
mRNA_6201
remove
mRNA_6202
plot
remove
mRNA_6203
plot