Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
14571 and 14572 are separated by 176 nucleotides
14572 and 14573 are separated by 101 nucleotides
14573 and 14574 are separated by 445 nucleotides
14574 and 14575 are separated by 562 nucleotides
mRNA_6203: 14571 - HMMPfam-HbrB-like-PF08539, at 240,769 to 243,130
14571
mRNA_6204: 14572 - KOG1618 Predicted phosphatase, at 243,307 to 244,867
14572
mRNA_6205: 14573 - HMMPfam-Peptidase M50B-like-PF13398, at 244,969 to 246,074
14573
mRNA_6206: 14574 - K10524 NRK1_2 nicotinamide/nicotinate riboside kinase, at 246,520 to 247,686
14574
mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248,249 to 248,882
14575
Group
Condition
mRNA
_6203
mRNA
_6204
mRNA
_6205
mRNA
_6206
mRNA
_6207
14571
14572
14573
14574
14575
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-0.0
-0.6
-0.3
-0.8
auxotrophy
YNB Glucose
-0.6
-0.1
-0.3
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.1
-0.1
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.0
+0.3
-0.2
-0.5
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.0
-0.5
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.3
+0.1
-0.1
-0.0
auxotrophy
Dropout Complete
-0.6
-0.0
+0.1
+0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.5
+0.5
-0.1
-0.3
growth on oleic acid
YNB Glucose
-0.5
+0.4
-0.3
+0.3
-0.2
growth on ricinoleic acid
YNB Glucose
-0.2
+0.2
-0.1
-0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.3
+0.2
-0.2
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.0
+0.5
-0.4
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.0
+0.2
+0.2
-0.4
growth on oleic acid
YNB Oleic Acid
-0.4
+0.4
-0.2
+0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.4
+0.1
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.0
+0.3
+0.0
-0.1
growth on ypd
YPD
-0.5
+0.2
+0.5
+0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.4
+0.8
-0.3
-0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.4
-0.0
+0.4
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
+0.1
+0.4
-0.5
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
+0.0
-0.0
+0.3
+0.6
remove
mRNA_6203
plot
remove
mRNA_6204
plot
remove
mRNA_6205
remove
mRNA_6206
plot
remove
mRNA_6207
plot