Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14571 and 14572 are separated by 176 nucleotides14572 and 14573 are separated by 101 nucleotides14573 and 14574 are separated by 445 nucleotides14574 and 14575 are separated by 562 nucleotides mRNA_6203: 14571 - HMMPfam-HbrB-like-PF08539, at 240,769 to 243,130 14571 mRNA_6204: 14572 - KOG1618 Predicted phosphatase, at 243,307 to 244,867 14572 mRNA_6205: 14573 - HMMPfam-Peptidase M50B-like-PF13398, at 244,969 to 246,074 14573 mRNA_6206: 14574 - K10524 NRK1_2 nicotinamide/nicotinate riboside kinase, at 246,520 to 247,686 14574 mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248,249 to 248,882 14575
Group Condition mRNA_6203 mRNA_6204 mRNA_6205 mRNA_6206 mRNA_6207
14571 14572 14573 14574 14575
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.0 -0.6 -0.3 -0.8
auxotrophy YNB Glucose -0.6 -0.1 -0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.1 -0.1 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.3 -0.2 -0.5 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.0 -0.5 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 +0.1 -0.1 -0.0
auxotrophy Dropout Complete -0.6 -0.0 +0.1 +0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.5 +0.5 -0.1 -0.3
growth on oleic acid YNB Glucose -0.5 +0.4 -0.3 +0.3 -0.2
growth on ricinoleic acid YNB Glucose -0.2 +0.2 -0.1 -0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 +0.2 -0.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.0 +0.5 -0.4 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.0 +0.2 +0.2 -0.4
growth on oleic acid YNB Oleic Acid -0.4 +0.4 -0.2 +0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.4 +0.1 +0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.0 +0.3 +0.0 -0.1
growth on ypd YPD -0.5 +0.2 +0.5 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.4 +0.8 -0.3 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.4 -0.0 +0.4 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 +0.1 +0.4 -0.5 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.0 -0.0 +0.3 +0.6
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