Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14572 and 14573 are separated by 101 nucleotides14573 and 14574 are separated by 445 nucleotides14574 and 14575 are separated by 562 nucleotides14575 and 14576 are separated by 683 nucleotides mRNA_6204: 14572 - KOG1618 Predicted phosphatase, at 243,307 to 244,867 14572 mRNA_6205: 14573 - HMMPfam-Peptidase M50B-like-PF13398, at 244,969 to 246,074 14573 mRNA_6206: 14574 - K10524 NRK1_2 nicotinamide/nicotinate riboside kinase, at 246,520 to 247,686 14574 mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248,249 to 248,882 14575 mRNA_6208: 14576 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 249,566 to 251,082 14576
Group Condition mRNA_6204 mRNA_6205 mRNA_6206 mRNA_6207 mRNA_6208
14572 14573 14574 14575 14576
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.4 -0.5 +0.0 -2.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.6 -0.3 -0.8 +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.1 -0.1 -0.0 -0.3
auxotrophy YNB Glucose -0.1 -0.3 -0.1 -0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.5 -0.1 -0.3 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 -0.5 -0.5 +0.7
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.5 -0.1 -0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.1 +0.1 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.8 -0.3 -0.7 -0.2
growth on ricinoleic acid YNB Glucose +0.2 -0.1 -0.3 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 -0.1 -0.6 +0.8
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.2 +0.2 -0.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.2 -0.2 -0.5 +0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.0 +0.3 +0.6 -0.5
growth on oleic acid YNB Oleic Acid +0.4 -0.2 +0.1 -0.0 +0.2
auxotrophy Dropout Complete -0.0 +0.1 +0.0 -0.0 +0.4
growth on oleic acid YNB Glucose +0.4 -0.3 +0.3 -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.0 +0.4 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.3 +0.0 -0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.5 -0.4 +0.0 +0.6
growth on ypd YPD +0.2 +0.5 +0.1 -0.1 +0.2
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