Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14573 and 14574 are separated by 445 nucleotides14574 and 14575 are separated by 562 nucleotides14575 and 14576 are separated by 683 nucleotides14576 and 14577 are separated by 1361 nucleotides mRNA_6205: 14573 - HMMPfam-Peptidase M50B-like-PF13398, at 244,969 to 246,074 14573 mRNA_6206: 14574 - K10524 NRK1_2 nicotinamide/nicotinate riboside kinase, at 246,520 to 247,686 14574 mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248,249 to 248,882 14575 mRNA_6208: 14576 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 249,566 to 251,082 14576 mRNA_6209: 14577 - K03006 RPB1, POLR2A DNA-directed RNA polymerase II subunit RPB1, at 252,444 to 258,337 14577
Group Condition mRNA_6205 mRNA_6206 mRNA_6207 mRNA_6208 mRNA_6209
14573 14574 14575 14576 14577
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.5 +0.0 -2.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.3 -0.8 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.5 -0.5 +0.7 N.D.
auxotrophy YNB Glucose -0.3 -0.1 -0.2 +0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.0 -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 -0.3 -0.7 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.1 -0.3 +0.6 N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.3 +0.1 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.2 -0.5 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 -0.6 +0.8 N.D.
growth on oleic acid YNB Oleic Acid -0.2 +0.1 -0.0 +0.2 N.D.
growth on oleic acid YNB Glucose -0.3 +0.3 -0.2 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.2 -0.4 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.4 -0.0 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.3 +0.6 -0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.2 -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.5 -0.1 -0.3 +0.3 N.D.
auxotrophy Dropout Complete +0.1 +0.0 -0.0 +0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.0 -0.1 +0.4 N.D.
growth on ypd YPD +0.5 +0.1 -0.1 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 -0.4 +0.0 +0.6 N.D.
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