Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14575 and 14576 are separated by 683 nucleotides14576 and 14577 are separated by 1361 nucleotides14577 and 14578 are separated by 1280 nucleotides14578 and 14579 are separated by 94 nucleotides mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248,249 to 248,882 14575 mRNA_6208: 14576 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 249,566 to 251,082 14576 mRNA_6209: 14577 - K03006 RPB1, POLR2A DNA-directed RNA polymerase II subunit RPB1, at 252,444 to 258,337 14577 mRNA_6210: 14578 - HMMPfam-DNA replication and checkpoint protein-PF11719, at 259,618 to 261,776 14578 mRNA_6211: 14579 - Hypothetical Protein, at 261,871 to 262,723 14579
Group Condition mRNA_6207 mRNA_6208 mRNA_6209 mRNA_6210 mRNA_6211
14575 14576 14577 14578 14579
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -2.4 N.D. N.D. -2.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 +0.5 N.D. N.D. -1.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 N.D. N.D. -0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.2 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.7 N.D. N.D. -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.6 N.D. N.D. -0.7
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.3 N.D. N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.3 N.D. N.D. -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.6 -0.5 N.D. N.D. -0.2
auxotrophy YNB Glucose -0.2 +0.3 N.D. N.D. -0.0
auxotrophy Dropout Complete -0.0 +0.4 N.D. N.D. -0.2
growth on oleic acid YNB Glucose -0.2 +0.3 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.1 N.D. N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 N.D. N.D. -0.0
growth on ypd YPD -0.1 +0.2 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose +0.1 +0.1 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 +0.8 N.D. N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.4 N.D. N.D. +0.5
growth on oleic acid YNB Oleic Acid -0.0 +0.2 N.D. N.D. +0.5
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.4 N.D. N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.6 N.D. N.D. +0.4
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