Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14582 and 14583 are separated by 272 nucleotides14583 and 14584 are separated by 986 nucleotides14584 and 14585 are separated by 329 nucleotides14585 and 14586 are separated by 705 nucleotides mRNA_6214: 14582 - K11684 BDF1 bromodomain-containing factor 1, at 268,724 to 272,351 14582 mRNA_6215: 14583 - Hypothetical Protein, at 272,624 to 273,109 14583 mRNA_6216: 14584 - K03120 TBP, tbp transcription initiation factor TFIID TATA-box-binding protein, at 274,096 to 275,401 14584 mRNA_6217: 14585 - K17362 ACOT13 acyl-coenzyme A thioesterase 13, at 275,731 to 276,667 14585 mRNA_6218: 14586 - K03687 GRPE molecular chaperone GrpE, at 277,373 to 277,948 14586
Group Condition mRNA_6214 mRNA_6215 mRNA_6216 mRNA_6217 mRNA_6218
14582 14583 14584 14585 14586
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.6 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.4 N.D. -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.5 N.D. -0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.2 N.D. +0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 N.D. -0.2 N.D.
auxotrophy YNB Glucose N.D. -0.1 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.2 N.D. -0.3 N.D.
growth on oleic acid YNB Glucose N.D. +0.3 N.D. -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.9 N.D. -0.9 N.D.
auxotrophy Dropout Complete N.D. +0.2 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 N.D. +0.0 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.1 N.D. -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.4 N.D. -0.3 N.D.
growth on ypd YPD N.D. +0.0 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 N.D. -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +1.0 N.D. -0.2 N.D.
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