Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14583 and 14584 are separated by 986 nucleotides14584 and 14585 are separated by 329 nucleotides14585 and 14586 are separated by 705 nucleotides14586 and 14587 are separated by 435 nucleotides mRNA_6215: 14583 - Hypothetical Protein, at 272,624 to 273,109 14583 mRNA_6216: 14584 - K03120 TBP, tbp transcription initiation factor TFIID TATA-box-binding protein, at 274,096 to 275,401 14584 mRNA_6217: 14585 - K17362 ACOT13 acyl-coenzyme A thioesterase 13, at 275,731 to 276,667 14585 mRNA_6218: 14586 - K03687 GRPE molecular chaperone GrpE, at 277,373 to 277,948 14586 mRNA_6219: 14587 - HMMPfam-Sec20-PF03908, at 278,384 to 280,109 14587
Group Condition mRNA_6215 mRNA_6216 mRNA_6217 mRNA_6218 mRNA_6219
14583 14584 14585 14586 14587
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 N.D. -0.2 N.D. -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. -0.2 N.D. -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 N.D. -0.4 N.D. -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.3 N.D. -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. -0.3 N.D. -0.7
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 N.D. +0.6 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. -0.1 N.D. +0.0
growth on ricinoleic acid YNB Glucose +0.4 N.D. -0.3 N.D. -0.7
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.3 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 N.D. -0.1 N.D. -0.8
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.2 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 N.D. -0.9 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. -0.3 N.D. -0.2
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.0 N.D. -0.1
growth on oleic acid YNB Glucose +0.3 N.D. -0.4 N.D. +0.1
growth on ypd YPD +0.0 N.D. +0.2 N.D. +0.0
auxotrophy Dropout Complete +0.2 N.D. -0.1 N.D. +0.2
auxotrophy YNB Glucose -0.1 N.D. -0.1 N.D. +0.5
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. -0.1 N.D. +0.5
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. +0.0 N.D. +0.7
facs on lipid accumulation Sorted High BODIPY Gate +1.0 N.D. -0.2 N.D. +0.2
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