Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14587 and 14588 are separated by 2453 nucleotides14588 and 14589 are separated by 225 nucleotides14589 and 14590 are separated by 285 nucleotides14590 and 14591 are separated by 544 nucleotides mRNA_6219: 14587 - HMMPfam-Sec20-PF03908, at 278,384 to 280,109 14587 mRNA_6220: 14588 - Hypothetical Protein, at 282,563 to 283,196 14588 mRNA_6221: 14589 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SMART-Broad-Complex, Tramtrack and Bric a brac-SM00225,SUPERFAMILY--SSF54695, at 283,422 to 285,141 14589 mRNA_6222: 14590 - K07088 K07088 uncharacterized protein, at 285,427 to 287,812 14590 mRNA_6223: 14591 - BLAST acetyl-coenzyme A synthetase [Rhizoctonia solani AG-1..., at 288,357 to 288,729 14591
Group Condition mRNA_6219 mRNA_6220 mRNA_6221 mRNA_6222 mRNA_6223
14587 14588 14589 14590 14591
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.4 -2.4 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.1 -0.6 -0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.6 -0.4 +0.3 -0.1
growth on ricinoleic acid YNB Glucose -0.7 -0.5 +0.4 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.2 -0.3 +0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.6 +0.7 +0.0 +0.2
growth on ypd YPD +0.0 -0.0 -0.3 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 +0.7 -0.1 +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.2 -0.1 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +1.4 -0.5 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.4 +0.6 -0.5 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 +0.1 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.9 -0.1 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 +0.3 +0.8 -0.1 +0.3
auxotrophy YNB Glucose +0.5 -0.6 +1.0 -0.7 +0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.7 -0.0 -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.7 -0.7 +0.9 -0.4 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.2 +0.1 +0.3 +0.1
growth on oleic acid YNB Glucose +0.1 +0.3 +0.3 +0.1 +0.1
auxotrophy Dropout Complete +0.2 -0.2 +0.9 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +1.5 -0.0 +0.2 +0.2
remove
mRNA_6219
plot
remove
mRNA_6220
plot
remove
mRNA_6221
remove
mRNA_6222
plot
remove
mRNA_6223
plot