Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14589 and 14590 are separated by 285 nucleotides14590 and 14591 are separated by 544 nucleotides14591 and 14592 are separated by 961 nucleotides14592 and 14593 are separated by 36 nucleotides mRNA_6221: 14589 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SMART-Broad-Complex, Tramtrack and Bric a brac-SM00225,SUPERFAMILY--SSF54695, at 283,422 to 285,141 14589 mRNA_6222: 14590 - K07088 K07088 uncharacterized protein, at 285,427 to 287,812 14590 mRNA_6223: 14591 - BLAST acetyl-coenzyme A synthetase [Rhizoctonia solani AG-1..., at 288,357 to 288,729 14591 mRNA_6224: 14592 - Hypothetical Protein, at 289,691 to 292,264 14592 mRNA_6225: 14593 - Hypothetical Protein, at 292,301 to 294,618 14593
Group Condition mRNA_6221 mRNA_6222 mRNA_6223 mRNA_6224 mRNA_6225
14589 14590 14591 14592 14593
ypd buoyancy 40 hrs No Buoyancy Separation -2.4 +0.1 +0.2 -1.6 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 +0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.1 +0.1 -0.6 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.4 +0.2 +0.1 +0.2
growth on ypd YPD -0.3 +0.0 -0.0 +0.5 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 +0.1 +0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.3 -0.1 +0.4 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 +0.3 +0.0 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.3 +0.0 +0.4 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 +0.0 +0.2 -0.5 +0.1
growth on ricinoleic acid YNB Glucose +0.4 -0.2 +0.2 +0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.2 +0.2 +0.2 +0.3
growth on oleic acid YNB Oleic Acid -0.0 -0.0 +0.2 +0.4 +0.2
growth on oleic acid YNB Glucose +0.3 +0.1 +0.1 +0.4 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 +0.1 +0.3 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 -0.1 +0.3 +0.3 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 +0.5 +0.5 +0.4
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.5 +0.2 +1.3 +0.1
auxotrophy YNB Glucose +1.0 -0.7 +0.3 +1.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.9 -0.4 +0.3 +1.1 +0.3
auxotrophy Dropout Complete +0.9 -0.0 +0.2 +1.3 +0.3
remove
mRNA_6221
plot
remove
mRNA_6222
plot
remove
mRNA_6223
remove
mRNA_6224
plot
remove
mRNA_6225
plot