Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14598 and 14599 are separated by 329 nucleotides14599 and 14600 are separated by 231 nucleotides14600 and 14601 are separated by 516 nucleotides14601 and 14602 are separated by 1450 nucleotides mRNA_6230: 14598 - K10688 UBE2W, UBC16 ubiquitin-conjugating enzyme E2 W, at 306,149 to 307,289 14598 mRNA_6231: 14599 - KOG2358 NifU-like domain-containing proteins, at 307,619 to 308,722 14599 mRNA_6232: 14600 - K17450 ACO2 homoaconitase, at 308,954 to 311,929 14600 mRNA_6233: 14601 - K16945 CDC11 cell division control protein 11, at 312,446 to 314,280 14601 mRNA_6234: 14602 - K00318 PRODH proline dehydrogenase, at 315,731 to 317,718 14602
Group Condition mRNA_6230 mRNA_6231 mRNA_6232 mRNA_6233 mRNA_6234
14598 14599 14600 14601 14602
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -5.0 -0.5 -0.4 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -4.3 -0.7 -0.5 +0.1
growth on oleic acid YNB Glucose -0.3 -1.2 -1.6 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -1.0 -1.8 -0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 -1.0 -1.3 -0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.7 -1.4 -0.1 -0.0
auxotrophy YNB Glucose +0.3 -0.6 -1.3 -0.5 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -1.1 -0.1 +0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.5 -0.3 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -2.1 -0.3 -0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.1 -0.8 -1.2 +0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.5 -1.5 +0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.6 -0.9 +0.8 -0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.1 -0.2 +0.0 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.9 -0.1 -1.0 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 +0.4 +0.1 -0.2
auxotrophy Dropout Complete +0.3 -0.0 -0.2 +0.1 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.2 +0.4 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 +0.3 +0.1 -0.1
growth on ypd YPD +0.3 +0.2 +0.5 +0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +1.0 +0.5 +0.1 -0.4
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