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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14599 and 14600 are separated by 231 nucleotides
14600 and 14601 are separated by 516 nucleotides
14601 and 14602 are separated by 1450 nucleotides
14602 and 14603 are separated by 416 nucleotides
mRNA_6231: 14599 - KOG2358 NifU-like domain-containing proteins, at 307,619 to 308,722
14599
mRNA_6232: 14600 - K17450 ACO2 homoaconitase, at 308,954 to 311,929
14600
mRNA_6233: 14601 - K16945 CDC11 cell division control protein 11, at 312,446 to 314,280
14601
mRNA_6234: 14602 - K00318 PRODH proline dehydrogenase, at 315,731 to 317,718
14602
mRNA_6235: 14603 - K17279 REEP5_6 receptor expression-enhancing protein 5/6, at 318,135 to 318,876
14603
Group
Condition
mRNA
_6231
mRNA
_6232
mRNA
_6233
mRNA
_6234
mRNA
_6235
14599
14600
14601
14602
14603
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-5.0
-0.5
-0.4
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-4.3
-0.7
-0.5
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-1.0
-1.3
-0.5
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.0
-1.8
-0.0
-0.0
N.D.
growth on oleic acid
YNB Glucose
-1.2
-1.6
+0.1
-0.1
N.D.
auxotrophy
YNB Glucose
-0.6
-1.3
-0.5
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-2.1
-0.3
-0.1
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.7
-1.4
-0.1
-0.0
N.D.
growth on ricinoleic acid
YNB Glucose
-0.8
-1.2
+0.3
-0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-1.5
+0.2
+0.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.1
-0.1
+0.0
-0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.3
-0.3
-0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-1.0
-0.2
-0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.9
+0.8
-0.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
-0.2
+0.0
+0.0
N.D.
auxotrophy
Dropout Complete
-0.0
-0.2
+0.1
+0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.4
-0.1
-0.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.4
+0.1
-0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
+0.3
+0.1
-0.1
N.D.
growth on ypd
YPD
+0.2
+0.5
+0.3
-0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+1.0
+0.5
+0.1
-0.4
N.D.
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