Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14599 and 14600 are separated by 231 nucleotides14600 and 14601 are separated by 516 nucleotides14601 and 14602 are separated by 1450 nucleotides14602 and 14603 are separated by 416 nucleotides mRNA_6231: 14599 - KOG2358 NifU-like domain-containing proteins, at 307,619 to 308,722 14599 mRNA_6232: 14600 - K17450 ACO2 homoaconitase, at 308,954 to 311,929 14600 mRNA_6233: 14601 - K16945 CDC11 cell division control protein 11, at 312,446 to 314,280 14601 mRNA_6234: 14602 - K00318 PRODH proline dehydrogenase, at 315,731 to 317,718 14602 mRNA_6235: 14603 - K17279 REEP5_6 receptor expression-enhancing protein 5/6, at 318,135 to 318,876 14603
Group Condition mRNA_6231 mRNA_6232 mRNA_6233 mRNA_6234 mRNA_6235
14599 14600 14601 14602 14603
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -5.0 -0.5 -0.4 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -4.3 -0.7 -0.5 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -1.0 -1.3 -0.5 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.0 -1.8 -0.0 -0.0 N.D.
growth on oleic acid YNB Glucose -1.2 -1.6 +0.1 -0.1 N.D.
auxotrophy YNB Glucose -0.6 -1.3 -0.5 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -2.1 -0.3 -0.1 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.7 -1.4 -0.1 -0.0 N.D.
growth on ricinoleic acid YNB Glucose -0.8 -1.2 +0.3 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -1.5 +0.2 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 -0.1 +0.0 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.3 -0.3 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.0 -0.2 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.9 +0.8 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.1 -0.2 +0.0 +0.0 N.D.
auxotrophy Dropout Complete -0.0 -0.2 +0.1 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.4 -0.1 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.4 +0.1 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.3 +0.1 -0.1 N.D.
growth on ypd YPD +0.2 +0.5 +0.3 -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +1.0 +0.5 +0.1 -0.4 N.D.
remove
mRNA_6231
plot
remove
mRNA_6232
plot
remove
mRNA_6233
remove
mRNA_6234
plot
remove
mRNA_6235
plot