Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14601 and 14602 are separated by 1450 nucleotides14602 and 14603 are separated by 416 nucleotides14603 and 14604 are separated by 643 nucleotides14604 and 14605 are separated by 264 nucleotides mRNA_6233: 14601 - K16945 CDC11 cell division control protein 11, at 312,446 to 314,280 14601 mRNA_6234: 14602 - K00318 PRODH proline dehydrogenase, at 315,731 to 317,718 14602 mRNA_6235: 14603 - K17279 REEP5_6 receptor expression-enhancing protein 5/6, at 318,135 to 318,876 14603 mRNA_6236: 14604 - Hypothetical Protein, at 319,520 to 321,215 14604 mRNA_6237: 14605 - K20061 ALY1_2, ART3_6 arrestin-related trafficking adapter 3/6, at 321,480 to 324,944 14605
Group Condition mRNA_6233 mRNA_6234 mRNA_6235 mRNA_6236 mRNA_6237
14601 14602 14603 14604 14605
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 N.D. -0.2 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.4 N.D. -0.3 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.3 N.D. -0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.3 N.D. +0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 N.D. -0.1 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.3 N.D. +0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.1 N.D. -0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.5 N.D. -0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.1 N.D. -0.1 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 N.D. -0.1 -0.0
auxotrophy YNB Glucose -0.5 +0.0 N.D. -0.3 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.0 N.D. -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.0 N.D. -0.3 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.2 N.D. -0.1 -0.1
growth on ypd YPD +0.3 -0.0 N.D. -0.2 +0.2
growth on oleic acid YNB Oleic Acid +0.0 +0.0 N.D. +0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 N.D. -0.2 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 -0.1 N.D. -0.2 -0.2
growth on oleic acid YNB Glucose +0.1 -0.1 N.D. -0.0 +0.2
growth on ricinoleic acid YNB Glucose +0.3 -0.1 N.D. -0.1 +0.3
auxotrophy Dropout Complete +0.1 +0.0 N.D. -0.0 +0.7
remove
mRNA_6233
plot
remove
mRNA_6234
plot
remove
mRNA_6235
remove
mRNA_6236
plot
remove
mRNA_6237
plot