Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14606 and 14607 are separated by 1003 nucleotides14607 and 14608 are separated by 1099 nucleotides14608 and 14609 are separated by 1300 nucleotides14609 and 14610 are separated by 647 nucleotides mRNA_6238: 14606 - K13205 AAR2, C20orf4 A1 cistron-splicing factor AAR2, at 325,534 to 327,076 14606 mRNA_6239: 14607 - K01372 BLMH, pepC bleomycin hydrolase, at 328,080 to 329,843 14607 mRNA_6240: 14608 - SUPERFAMILY--SSF51445, at 330,943 to 332,434 14608 mRNA_6241: 14609 - Hypothetical Protein, at 333,735 to 334,704 14609 mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335,352 to 337,546 14610
Group Condition mRNA_6238 mRNA_6239 mRNA_6240 mRNA_6241 mRNA_6242
14606 14607 14608 14609 14610
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -0.1 +0.7 -0.2 -1.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.4 +0.7 -0.2 -2.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.5 -0.0 +0.4 -0.7
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.1 +0.2 +0.0 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.7 +0.0 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.5 +0.0 -0.1 +0.1 -0.4
growth on oleic acid YNB Glucose +0.1 -0.5 +0.3 +0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.3 -0.9 +0.1 +0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 +0.1 -0.2 +0.2
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.3 +0.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 -0.2 -0.2 +0.2
growth on ypd YPD -0.3 +0.1 -0.2 +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.1 +0.4 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.0 -0.1 +0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 -0.0 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.2 +0.1 +0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.2 +0.1 +0.5 +0.2 +0.1
auxotrophy YNB Glucose -0.3 +1.1 +0.5 +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.9 +0.4 +0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 +1.3 +0.2 -0.0 +0.1
auxotrophy Dropout Complete +0.0 +1.1 +0.4 +0.1 +0.2
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