Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14608 and 14609 are separated by 1300 nucleotides14609 and 14610 are separated by 647 nucleotides14610 and 14611 are separated by 385 nucleotides14611 and 14612 are separated by 692 nucleotides mRNA_6240: 14608 - SUPERFAMILY--SSF51445, at 330,943 to 332,434 14608 mRNA_6241: 14609 - Hypothetical Protein, at 333,735 to 334,704 14609 mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335,352 to 337,546 14610 mRNA_6243: 14611 - Hypothetical Protein, at 337,932 to 340,072 14611 mRNA_6244: 14612 - K07901 RAB8A, MEL Ras-related protein Rab-8A, at 340,765 to 342,148 14612
Group Condition mRNA_6240 mRNA_6241 mRNA_6242 mRNA_6243 mRNA_6244
14608 14609 14610 14611 14612
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 -0.2 -2.3 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 -0.2 -1.5 -0.5 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.0 -0.7 -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.3 +0.0 -0.6 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.1 -0.2 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.1 -0.1 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.2 -0.2 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.1 -0.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 -0.1 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.0 -0.0 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 +0.2 +0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.4 -0.7 +0.4 N.D.
growth on oleic acid YNB Glucose +0.3 +0.1 -0.3 +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 +0.1 +0.8 +0.1 N.D.
growth on ypd YPD -0.2 +0.1 +0.1 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.2 +0.2 +0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.0 +0.1 +0.3 N.D.
growth on ricinoleic acid YNB Glucose +0.5 +0.2 +0.1 +0.1 N.D.
auxotrophy Dropout Complete +0.4 +0.1 +0.2 +0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.3 +0.2 +0.1 N.D.
auxotrophy YNB Glucose +0.5 +0.2 +0.1 +0.3 N.D.
remove
mRNA_6240
plot
remove
mRNA_6241
plot
remove
mRNA_6242
remove
mRNA_6243
plot
remove
mRNA_6244
plot