Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14610 and 14611 are separated by 385 nucleotides14611 and 14612 are separated by 692 nucleotides14612 and 14613 are separated by 1071 nucleotides14613 and 14614 are separated by 1393 nucleotides mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335,352 to 337,546 14610 mRNA_6243: 14611 - Hypothetical Protein, at 337,932 to 340,072 14611 mRNA_6244: 14612 - K07901 RAB8A, MEL Ras-related protein Rab-8A, at 340,765 to 342,148 14612 mRNA_6245: 14613 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 343,220 to 344,409 14613 mRNA_6246: 14614 - Hypothetical Protein, at 345,803 to 347,833 14614
Group Condition mRNA_6242 mRNA_6243 mRNA_6244 mRNA_6245 mRNA_6246
14610 14611 14612 14613 14614
growth on ricinoleic acid YNB Ricinoleic Acid -1.5 -0.5 N.D. -0.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -2.3 -0.1 N.D. +0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.4 N.D. -1.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.3 N.D. -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 N.D. -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.1 N.D. +0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.1 N.D. -0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.4 N.D. -0.4 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.4 N.D. +0.5 -0.3
growth on oleic acid YNB Oleic Acid -0.6 -0.2 N.D. +0.6 -0.0
growth on ypd YPD +0.1 +0.1 N.D. -0.2 -0.0
growth on oleic acid YNB Glucose -0.3 +0.2 N.D. +0.4 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.3 N.D. +0.8 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.3 N.D. +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 N.D. +0.7 -0.2
growth on ricinoleic acid YNB Glucose +0.1 +0.1 N.D. +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.8 +0.1 N.D. -0.1 -0.4
auxotrophy YNB Glucose +0.1 +0.3 N.D. +0.3 -0.0
auxotrophy Dropout Complete +0.2 +0.2 N.D. +0.2 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 N.D. +0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.3 N.D. +0.5 -0.0
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