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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14615 and 14616 are separated by 204 nucleotides
14616 and 14617 are separated by 381 nucleotides
14617 and 14618 are separated by 658 nucleotides
14618 and 14619 are separated by 395 nucleotides
mRNA_6247: 14615 - K01551 arsA, ASNA1 arsenite-transporting ATPase, at 348,270 to 350,050
14615
mRNA_6248: 14616 - Interpro GET complex subunit GET2 0, at 350,255 to 351,472
14616
mRNA_6249: 14617 - K01052 LIPA lysosomal acid lipase/cholesteryl ester hydrolase, at 351,854 to 354,817
14617
mRNA_6250: 14618 - Hypothetical Protein, at 355,476 to 357,206
14618
mRNA_6251: 14619 - KOG4188 Uncharacterized conserved protein, at 357,602 to 358,776
14619
Group
Condition
mRNA
_6247
mRNA
_6248
mRNA
_6249
mRNA
_6250
mRNA
_6251
14615
14616
14617
14618
14619
growth on oleic acid
YNB Glucose
-1.5
N.D.
-0.3
N.D.
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.8
N.D.
+0.1
N.D.
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
N.D.
-0.3
N.D.
-0.4
auxotrophy
YNB Glucose
-1.5
N.D.
-0.2
N.D.
+0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.1
N.D.
-0.4
N.D.
+0.4
auxotrophy
Dropout Complete
-1.2
N.D.
-0.3
N.D.
+0.6
growth on ricinoleic acid
YNB Glucose
-1.2
N.D.
-0.5
N.D.
+0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
N.D.
-0.2
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.9
N.D.
-0.2
N.D.
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.5
N.D.
+0.1
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.7
N.D.
+0.1
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
N.D.
-0.2
N.D.
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.3
N.D.
-0.2
N.D.
+0.9
growth on oleic acid
YNB Oleic Acid
-0.1
N.D.
-0.1
N.D.
-0.2
growth on ypd
YPD
-0.2
N.D.
-0.1
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
N.D.
+0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
N.D.
-0.3
N.D.
+0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.4
N.D.
+0.1
N.D.
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
+0.1
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
N.D.
-0.2
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
-0.2
N.D.
+0.3
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