Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14619 and 14620 are separated by 55 nucleotides14620 and 14621 are separated by 1016 nucleotides14621 and 14622 are separated by 401 nucleotides14622 and 14623 are separated by 174 nucleotides mRNA_6251: 14619 - KOG4188 Uncharacterized conserved protein, at 357,602 to 358,776 14619 mRNA_6252: 14620 - K10845 TTDA, GTF2H5, TFB5 TFIIH basal transcription factor complex TTD-A subunit, at 358,832 to 359,230 14620 mRNA_6253: 14621 - HMMPfam-FR47-like protein-PF08445,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 360,247 to 361,370 14621 mRNA_6254: 14622 - K20477 RGP1 RAB6A-GEF complex partner protein 2, at 361,772 to 365,441 14622 mRNA_6255: 14623 - K01452 E3.5.1.41 chitin deacetylase, at 365,616 to 367,386 14623
Group Condition mRNA_6251 mRNA_6252 mRNA_6253 mRNA_6254 mRNA_6255
14619 14620 14621 14622 14623
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. +0.1 -3.2 -1.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.2 -2.3 -0.2
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.4 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 N.D. +0.4 -1.7 +0.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -0.5 +0.0 -0.5
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. -0.0 -0.8 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.1 -1.1 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. -0.2 -0.4 -0.1
growth on oleic acid YNB Glucose +0.2 N.D. -0.5 -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.9 N.D. +0.1 -0.8 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. +0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. -0.2 -0.3 -0.2
growth on ypd YPD -0.1 N.D. +0.2 +0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. +0.4 -0.6 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 N.D. -0.1 -0.6 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. -0.2 +0.1 +0.0
auxotrophy YNB Glucose +0.5 N.D. +0.0 -0.5 +0.2
growth on ricinoleic acid YNB Glucose +0.8 N.D. +0.4 -0.2 -0.6
auxotrophy Dropout Complete +0.6 N.D. -0.2 +0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 N.D. -0.1 +0.5 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 N.D. -0.0 +0.8 +0.1
remove
mRNA_6251
plot
remove
mRNA_6252
plot
remove
mRNA_6253
remove
mRNA_6254
plot
remove
mRNA_6255
plot