Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14626 and 14627 are separated by 517 nucleotides14627 and 14628 are separated by 463 nucleotides14628 and 14629 are separated by 1234 nucleotides14629 and 14630 are separated by 464 nucleotides mRNA_6258: 14626 - K01687 ilvD dihydroxy-acid dehydratase, at 371,903 to 374,480 14626 mRNA_6259: 14627 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 374,998 to 377,098 14627 mRNA_6260: 14628 - HMMPfam-Meiosis protein SPO22/ZIP4 like-PF08631, at 377,562 to 381,779 14628 mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383,014 to 384,624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385,089 to 388,417 14630
Group Condition mRNA_6258 mRNA_6259 mRNA_6260 mRNA_6261 mRNA_6262
14626 14627 14628 14629 14630
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -1.9 +0.1 -0.1 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 +0.1 -0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.7 +0.0 +0.0 -0.4
auxotrophy YNB Glucose -0.2 -0.3 +0.1 -0.3 +0.1
growth on ypd YPD -0.0 -0.0 -0.1 -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.0 -0.0 +0.1 -0.3
growth on oleic acid YNB Glucose -0.2 -0.4 +0.3 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.3 +0.0 -0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.2 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 +0.2 -0.2 +0.1
auxotrophy Dropout Complete +0.2 -0.2 -0.0 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +0.2 -0.2 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.9 +0.5 -0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.4 +0.2 +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.2 +0.1 -0.3 +0.1
growth on oleic acid YNB Oleic Acid -0.4 +0.2 +0.3 -0.1 +0.3
growth on ricinoleic acid YNB Glucose +0.2 -0.4 +0.2 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 -0.2 +0.7 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.4 -0.3 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.0 +0.2 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.3 +0.4 +0.2
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