Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14627 and 14628 are separated by 463 nucleotides14628 and 14629 are separated by 1234 nucleotides14629 and 14630 are separated by 464 nucleotides14630 and 14631 are separated by 1439 nucleotides mRNA_6259: 14627 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 374,998 to 377,098 14627 mRNA_6260: 14628 - HMMPfam-Meiosis protein SPO22/ZIP4 like-PF08631, at 377,562 to 381,779 14628 mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383,014 to 384,624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385,089 to 388,417 14630 mRNA_6263: 14631 - Hypothetical Protein, at 389,857 to 392,694 14631
Group Condition mRNA_6259 mRNA_6260 mRNA_6261 mRNA_6262 mRNA_6263
14627 14628 14629 14630 14631
facs on lipid accumulation Sorted Low BODIPY Gate -1.9 +0.1 -0.1 -0.4 +0.4
growth on ypd YPD -0.0 -0.1 -0.2 -0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 -0.1 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.7 +0.0 +0.0 -0.4 +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 -0.3 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 -0.2 +0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.0 +0.1 -0.3 +0.1
auxotrophy YNB Glucose -0.3 +0.1 -0.3 +0.1 +0.4
growth on oleic acid YNB Glucose -0.4 +0.3 -0.2 +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 -0.3 +0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.0 -0.2 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.3 +0.2 -0.0 -0.1
auxotrophy Dropout Complete -0.2 -0.0 -0.0 +0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 +0.5 -0.1 +0.4 +0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 -0.2 +0.2 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.2 +0.0 +0.1 +0.7
growth on ricinoleic acid YNB Glucose -0.4 +0.2 +0.2 +0.3 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.2 +0.3 -0.2 +0.5
growth on oleic acid YNB Oleic Acid +0.2 +0.3 -0.1 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.3 +0.4 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.2 +0.7 +0.2 +0.4
remove
mRNA_6259
plot
remove
mRNA_6260
plot
remove
mRNA_6261
remove
mRNA_6262
plot
remove
mRNA_6263
plot