Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14629 and 14630 are separated by 464 nucleotides14630 and 14631 are separated by 1439 nucleotides14631 and 14632 are separated by 89 nucleotides14632 and 14633 are separated by 371 nucleotides mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383,014 to 384,624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385,089 to 388,417 14630 mRNA_6263: 14631 - Hypothetical Protein, at 389,857 to 392,694 14631 mRNA_6264: 14632 - KOG1550 Extracellular protein SEL-1 and related proteins, at 392,784 to 393,598 14632 mRNA_6265: 14633 - K07897 RAB7A Ras-related protein Rab-7A, at 393,970 to 395,012 14633
Group Condition mRNA_6261 mRNA_6262 mRNA_6263 mRNA_6264 mRNA_6265
14629 14630 14631 14632 14633
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.2 -1.1 N.D.
growth on ypd YPD -0.2 -0.2 -0.3 -0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.3 +0.1 -0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.1 -0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.0 -0.1 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4 +0.4 +0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.3 +0.1 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 -0.1 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 +0.4 -0.3 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.1 +0.1 +0.2 N.D.
auxotrophy YNB Glucose -0.3 +0.1 +0.4 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.4 +0.4 +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.1 +0.7 -0.6 N.D.
growth on oleic acid YNB Glucose -0.2 +0.2 +0.1 +0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 +0.4 -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.3 +0.5 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.2 -0.1 -0.1 N.D.
auxotrophy Dropout Complete -0.0 +0.1 +0.4 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.4 +0.4 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.2 +0.5 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 +0.2 +0.4 -0.3 N.D.
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