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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14635 and 14636 are separated by 167 nucleotides
14636 and 14637 are separated by 213 nucleotides
14637 and 14638 are separated by 725 nucleotides
14638 and 14639 are separated by 0 nucleotides
mRNA_6267: 14635 - KOG1721 FOG Zn-finger, at 399,476 to 403,885
14635
mRNA_6268: 14636 - HMMPfam-Survival motor neuron protein (SMN)-PF06003, at 404,053 to 405,342
14636
mRNA_6269: 14637 - KOG1336 Monodehydroascorbate/ferredoxin reductase, at 405,556 to 407,019
14637
mRNA_6270: 14638 - KOG2645 Type I phosphodiesterase/nucleotide pyrophosphatase, at 407,745 to 410,533
14638
mRNA_6271: 14639 - Hypothetical Protein, at 410,534 to 411,923
14639
Group
Condition
mRNA
_6267
mRNA
_6268
mRNA
_6269
mRNA
_6270
mRNA
_6271
14635
14636
14637
14638
14639
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.9
-0.4
+0.0
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.0
-0.5
-0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
+0.5
+0.1
+0.8
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.0
+0.4
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
+0.2
+0.4
-0.3
+0.2
growth on ypd
YPD
+0.1
+0.2
+0.2
+0.1
+0.2
growth on ricinoleic acid
YNB Glucose
+0.6
+0.5
+0.1
-0.1
-0.0
growth on oleic acid
YNB Glucose
+0.6
+0.2
+0.1
+0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+1.8
-0.5
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.3
+0.6
+0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.0
-0.8
+1.0
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
+0.6
+0.2
+0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.7
+0.5
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.4
+0.9
+0.6
+0.4
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+1.0
+0.7
-0.1
-0.2
auxotrophy
YNB Glucose
+0.3
+2.4
-0.3
-0.6
-0.2
auxotrophy
Dropout Complete
+0.5
+1.6
-0.1
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.7
+1.1
+0.2
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.3
+2.6
-0.1
-0.6
+0.1
growth on oleic acid
YNB Oleic Acid
+2.1
+0.1
+0.6
+0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.6
+0.7
+0.6
+0.1
+0.1
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