Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14642 and 14643 are separated by 360 nucleotides14643 and 14644 are separated by 793 nucleotides14644 and 14645 are separated by 128 nucleotides14645 and 14646 are separated by 140 nucleotides mRNA_6274: 14642 - Hypothetical Protein, at 418,088 to 419,666 14642 mRNA_6275: 14643 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 420,027 to 422,108 14643 mRNA_6276: 14644 - K12615 EDC3 enhancer of mRNA-decapping protein 3, at 422,902 to 424,921 14644 mRNA_6277: 14645 - KOG2812 Uncharacterized conserved protein, at 425,050 to 426,717 14645 mRNA_6278: 14646 - K17080 PHB1 prohibitin 1, at 426,858 to 428,286 14646
Group Condition mRNA_6274 mRNA_6275 mRNA_6276 mRNA_6277 mRNA_6278
14642 14643 14644 14645 14646
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.5 +0.1 N.D. -2.7
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.0 -0.0 N.D. -1.6
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.3 +0.3 N.D. -1.2
auxotrophy Dropout Complete +0.4 -0.8 -0.2 N.D. -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.8 -0.5 N.D. +0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.6 -0.0 N.D. +0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.0 +0.2 N.D. -1.0
growth on ricinoleic acid YNB Glucose +0.3 -0.2 -0.0 N.D. -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.4 +0.0 N.D. -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.4 -0.2 N.D. -0.2
growth on oleic acid YNB Oleic Acid +0.3 +0.4 -0.2 N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.2 -0.6 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.4 -0.3 N.D. +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.3 -0.1 N.D. -0.0
growth on oleic acid YNB Glucose +0.4 +0.3 -0.3 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine +0.5 -0.1 -0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.3 -0.4 N.D. +0.5
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.4 -0.1 N.D. +0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 +0.2 N.D. -0.2
auxotrophy YNB Glucose +0.2 -0.3 +0.0 N.D. +0.9
growth on ypd YPD -0.1 -0.1 +0.1 N.D. +1.0
remove
mRNA_6274
plot
remove
mRNA_6275
plot
remove
mRNA_6276
remove
mRNA_6277
plot
remove
mRNA_6278
plot