Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14644 and 14645 are separated by 128 nucleotides14645 and 14646 are separated by 140 nucleotides14646 and 14647 are separated by 200 nucleotides14647 and 14648 are separated by 398 nucleotides mRNA_6276: 14644 - K12615 EDC3 enhancer of mRNA-decapping protein 3, at 422,902 to 424,921 14644 mRNA_6277: 14645 - KOG2812 Uncharacterized conserved protein, at 425,050 to 426,717 14645 mRNA_6278: 14646 - K17080 PHB1 prohibitin 1, at 426,858 to 428,286 14646 mRNA_6279: 14647 - K13110 MFAP1 microfibrillar-associated protein 1, at 428,487 to 430,631 14647 mRNA_6280: 14648 - K14050 RABGGTA geranylgeranyl transferase type-2 subunit alpha, at 431,030 to 432,502 14648
Group Condition mRNA_6276 mRNA_6277 mRNA_6278 mRNA_6279 mRNA_6280
14644 14645 14646 14647 14648
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -2.7 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -1.6 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -1.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.2 N.D. -0.6 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -1.0 N.D. N.D.
growth on oleic acid YNB Glucose -0.3 N.D. -0.4 N.D. N.D.
auxotrophy Dropout Complete -0.2 N.D. -0.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.0 N.D. -0.5 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. -0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 N.D. +0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. -0.0 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. +0.5 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. +0.5 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.6 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. +0.5 N.D. N.D.
auxotrophy YNB Glucose +0.0 N.D. +0.9 N.D. N.D.
growth on ypd YPD +0.1 N.D. +1.0 N.D. N.D.
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