Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14647 and 14648 are separated by 398 nucleotides14648 and 14649 are separated by 301 nucleotides14649 and 14650 are separated by 289 nucleotides14650 and 14651 are separated by 330 nucleotides mRNA_6279: 14647 - K13110 MFAP1 microfibrillar-associated protein 1, at 428,487 to 430,631 14647 mRNA_6280: 14648 - K14050 RABGGTA geranylgeranyl transferase type-2 subunit alpha, at 431,030 to 432,502 14648 mRNA_6281: 14649 - HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909, at 432,804 to 433,205 14649 mRNA_6282: 14650 - HMMPfam-SET domain-PF00856,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-SET domain profile.-PS50280,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SMART-SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain-SM00317,SUPERFAMILY--SSF48452,SUPERFAMILY--SSF82199, at 433,495 to 438,419 14650 mRNA_6283: 14651 - HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879, at 438,750 to 440,581 14651
Group Condition mRNA_6279 mRNA_6280 mRNA_6281 mRNA_6282 mRNA_6283
14647 14648 14649 14650 14651
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.6 -0.1 -0.2
growth on oleic acid YNB Glucose N.D. N.D. -0.7 -0.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.1 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.3 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.3 -0.2 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.4 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.1 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.3 +0.1 +0.2
growth on ypd YPD N.D. N.D. -0.2 +0.2 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.2 +0.4 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.1 +0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.3 +0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.5 +0.3 -0.4
auxotrophy YNB Glucose N.D. N.D. +0.6 -0.0 -0.1
auxotrophy Dropout Complete N.D. N.D. +0.7 -0.3 +0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.8 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.6 +0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.6 +0.2 +0.1
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.5 +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.6 +0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +1.3 -0.1 -0.0
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