Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14648 and 14649 are separated by 301 nucleotides14649 and 14650 are separated by 289 nucleotides14650 and 14651 are separated by 330 nucleotides14651 and 14652 are separated by 141 nucleotides mRNA_6280: 14648 - K14050 RABGGTA geranylgeranyl transferase type-2 subunit alpha, at 431,030 to 432,502 14648 mRNA_6281: 14649 - HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909, at 432,804 to 433,205 14649 mRNA_6282: 14650 - HMMPfam-SET domain-PF00856,HMMPfam-TPR repeat-PF13414,ProSiteProfiles-TPR repeat profile.-PS50005,ProSiteProfiles-SET domain profile.-PS50280,ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SMART-SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain-SM00317,SUPERFAMILY--SSF48452,SUPERFAMILY--SSF82199, at 433,495 to 438,419 14650 mRNA_6283: 14651 - HMMPfam-FHA domain-PF00498,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879, at 438,750 to 440,581 14651 mRNA_6284: 14652 - BLAST macrofage activating glycoprotein, putative [Rhizocto..., at 440,723 to 442,428 14652
Group Condition mRNA_6280 mRNA_6281 mRNA_6282 mRNA_6283 mRNA_6284
14648 14649 14650 14651 14652
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.6 -0.1 -0.2 -0.5
growth on oleic acid YNB Glucose N.D. -0.7 -0.1 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -0.1 +0.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.1 +0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 -0.2 +0.2 +0.0
auxotrophy YNB Glucose N.D. +0.6 -0.0 -0.1 -0.7
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 +0.3 -0.4 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 +0.1 +0.2 -0.2
growth on oleic acid YNB Oleic Acid N.D. -0.4 +0.2 +0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.8 -0.1 -0.1 -0.7
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.3 -0.2 -0.2
auxotrophy Dropout Complete N.D. +0.7 -0.3 +0.2 -0.5
growth on ypd YPD N.D. -0.2 +0.2 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.2 -0.3 +0.8
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.6 +0.2 +0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.3 +0.2 -0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +1.3 -0.1 -0.0 -0.6
growth on ricinoleic acid YNB Glucose N.D. +0.5 +0.2 +0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.6 +0.1 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.2 +0.4 +0.0 +0.6
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.6 +0.3 +0.3 -0.1
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