Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14652 and 14653 are separated by 185 nucleotides14653 and 14654 are separated by 286 nucleotides14654 and 14655 are separated by 483 nucleotides14655 and 14656 are separated by 290 nucleotides mRNA_6284: 14652 - BLAST macrofage activating glycoprotein, putative [Rhizocto..., at 440,723 to 442,428 14652 mRNA_6285: 14653 - K05610 UCHL5, UCH37 ubiquitin carboxyl-terminal hydrolase L5, at 442,614 to 443,927 14653 mRNA_6286: 14654 - HMMPfam-Protein of unknown function (DUF3128)-PF11326, at 444,214 to 444,568 14654 mRNA_6287: 14655 - K01262 pepP Xaa-Pro aminopeptidase, at 445,052 to 447,744 14655 mRNA_6288: 14656 - KOG0876 Manganese superoxide dismutase, at 448,035 to 449,039 14656
Group Condition mRNA_6284 mRNA_6285 mRNA_6286 mRNA_6287 mRNA_6288
14652 14653 14654 14655 14656
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.8 N.D. -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.6 N.D. -0.1 -0.2
auxotrophy Dropout Complete -0.5 +0.5 N.D. -0.3 -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.6 N.D. +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.6 -0.4 N.D. -0.4 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +0.1 N.D. -0.1 -0.2
auxotrophy YNB Glucose -0.7 +0.5 N.D. -0.4 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.2 N.D. -0.0 +0.0
growth on ypd YPD -0.0 -1.4 N.D. -0.2 +1.1
growth on ricinoleic acid YNB Glucose -0.3 +0.1 N.D. -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.3 N.D. +0.0 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.2 N.D. -0.2 +0.6
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 N.D. -0.0 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.2 N.D. -0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.1 N.D. -0.3 +0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.8 +0.4 N.D. -0.1 -0.9
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.6 N.D. +0.1 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.7 +0.8 N.D. -0.3 +0.5
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.2 N.D. +0.1 +0.6
growth on oleic acid YNB Glucose -0.2 +0.1 N.D. -0.3 +1.0
growth on oleic acid YNB Oleic Acid -0.1 +0.4 N.D. -0.3 +1.4
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