Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14657 and 14658 are separated by 339 nucleotides14658 and 14659 are separated by 348 nucleotides14659 and 14660 are separated by 176 nucleotides14660 and 14661 are separated by 406 nucleotides mRNA_6289: 14657 - Hypothetical Protein, at 449,519 to 450,929 14657 mRNA_6290: 14658 - KOG0394 Ras-related GTPase, at 451,269 to 452,760 14658 mRNA_6291: 14659 - K12182 HGS, HRS, VPS27 hepatocyte growth factor-regulated tyrosine kinase substrate, at 453,109 to 455,308 14659 mRNA_6292: 14660 - K15082 RAD7 DNA repair protein RAD7, at 455,485 to 457,859 14660 mRNA_6293: 14661 - K18467 VPS29 vacuolar protein sorting-associated protein 29, at 458,266 to 459,644 14661
Group Condition mRNA_6289 mRNA_6290 mRNA_6291 mRNA_6292 mRNA_6293
14657 14658 14659 14660 14661
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.3 -2.4 +0.0 -3.8
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.4 -1.2 -0.2 -0.9
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.1 -0.4 -0.1 -1.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 -0.1 +0.2 -1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 +0.4 -0.3 -0.1 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.5 +0.4 -0.1 -1.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 +0.2 -0.3 -0.3
growth on ypd YPD -0.1 +0.2 +0.2 +0.3 -1.7
growth on ricinoleic acid YNB Glucose -0.0 -0.3 -0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.4 -0.4 +0.1 -0.3
auxotrophy YNB Glucose -0.5 -0.1 +0.5 -0.0 +0.0
growth on oleic acid YNB Glucose +0.2 -0.5 +0.3 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.4 +0.1 -0.1 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.5 +0.5 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 +0.4 +0.3 -0.3
growth on oleic acid YNB Oleic Acid +0.1 -0.5 +0.5 +0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.4 +0.5 +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.1 +0.1 +0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.1 +0.2 +0.0 -0.1
auxotrophy Dropout Complete -0.3 -0.0 +1.1 -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.7 +0.0 +0.5 +0.3 -0.1
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