Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14660 and 14661 are separated by 406 nucleotides14661 and 14662 are separated by 627 nucleotides14662 and 14663 are separated by 629 nucleotides14663 and 14664 are separated by 306 nucleotides mRNA_6292: 14660 - K15082 RAD7 DNA repair protein RAD7, at 455,485 to 457,859 14660 mRNA_6293: 14661 - K18467 VPS29 vacuolar protein sorting-associated protein 29, at 458,266 to 459,644 14661 mRNA_6294: 14662 - K00928 lysC aspartate kinase, at 460,272 to 462,518 14662 mRNA_6295: 14663 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 463,148 to 466,558 14663 mRNA_6296: 14664 - Hypothetical Protein, at 466,865 to 468,121 14664
Group Condition mRNA_6292 mRNA_6293 mRNA_6294 mRNA_6295 mRNA_6296
14660 14661 14662 14663 14664
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -3.8 N.D. -0.1 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -1.3 N.D. -0.3 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.4 N.D. -0.8 -0.5
growth on ypd YPD +0.3 -1.7 N.D. -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 N.D. -0.2 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 N.D. -0.7 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.7 N.D. -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -1.0 N.D. -0.2 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.9 N.D. -0.6 +0.8
growth on oleic acid YNB Glucose +0.3 -0.3 N.D. -0.6 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -1.1 N.D. -0.1 +0.6
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.3 N.D. -0.4 +0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.1 N.D. -0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 N.D. -0.1 -0.2
auxotrophy YNB Glucose -0.0 +0.0 N.D. -0.4 +0.4
growth on oleic acid YNB Oleic Acid +0.3 +0.2 N.D. -0.4 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.1 N.D. +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 N.D. -0.3 +0.6
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.1 N.D. +0.4 -0.0
auxotrophy Dropout Complete -0.1 +0.2 N.D. -0.3 +0.9
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.2 N.D. -0.2 +1.1
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