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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14661 and 14662 are separated by 627 nucleotides
14662 and 14663 are separated by 629 nucleotides
14663 and 14664 are separated by 306 nucleotides
14664 and 14665 are separated by 1029 nucleotides
mRNA_6293: 14661 - K18467 VPS29 vacuolar protein sorting-associated protein 29, at 458,266 to 459,644
14661
mRNA_6294: 14662 - K00928 lysC aspartate kinase, at 460,272 to 462,518
14662
mRNA_6295: 14663 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 463,148 to 466,558
14663
mRNA_6296: 14664 - Hypothetical Protein, at 466,865 to 468,121
14664
mRNA_6297: 14665 - K17970 MDV1, FIS2 mitochondrial division protein 1, at 469,151 to 471,840
14665
Group
Condition
mRNA
_6293
mRNA
_6294
mRNA
_6295
mRNA
_6296
mRNA
_6297
14661
14662
14663
14664
14665
facs on lipid accumulation
Sorted Low BODIPY Gate
-3.8
N.D.
-0.1
+0.6
-0.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.3
N.D.
-0.3
-0.7
-0.3
growth on ypd
YPD
-1.7
N.D.
-0.1
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
N.D.
-0.2
+0.4
-1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
N.D.
-0.8
-0.5
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
-0.2
-0.8
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
N.D.
-0.6
+0.8
-0.7
growth on oleic acid
YNB Glucose
-0.3
N.D.
-0.6
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
N.D.
-0.7
-0.4
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.1
N.D.
-0.1
+0.6
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
+0.4
-0.0
-1.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
N.D.
-0.1
-0.3
+0.3
growth on oleic acid
YNB Oleic Acid
+0.2
N.D.
-0.4
+0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
-0.4
+0.2
+0.3
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
-0.2
+0.3
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
-0.1
-0.2
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
+0.2
+0.2
-0.3
auxotrophy
YNB Glucose
+0.0
N.D.
-0.4
+0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
-0.3
+0.6
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
N.D.
-0.2
+1.1
-0.3
auxotrophy
Dropout Complete
+0.2
N.D.
-0.3
+0.9
+0.8
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