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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14662 and 14663 are separated by 629 nucleotides
14663 and 14664 are separated by 306 nucleotides
14664 and 14665 are separated by 1029 nucleotides
14665 and 14666 are separated by 152 nucleotides
mRNA_6294: 14662 - K00928 lysC aspartate kinase, at 460,272 to 462,518
14662
mRNA_6295: 14663 - K11593 ELF2C, AGO eukaryotic translation initiation factor 2C, at 463,148 to 466,558
14663
mRNA_6296: 14664 - Hypothetical Protein, at 466,865 to 468,121
14664
mRNA_6297: 14665 - K17970 MDV1, FIS2 mitochondrial division protein 1, at 469,151 to 471,840
14665
mRNA_6298: 14666 - K03842 ALG1 beta-1,4-mannosyltransferase, at 471,993 to 473,912
14666
Group
Condition
mRNA
_6294
mRNA
_6295
mRNA
_6296
mRNA
_6297
mRNA
_6298
14662
14663
14664
14665
14666
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.3
-0.7
-0.3
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.2
-0.8
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.8
-0.5
+0.1
N.D.
growth on oleic acid
YNB Glucose
N.D.
-0.6
-0.1
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.7
-0.4
+0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.2
+0.4
-1.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.4
-0.0
-1.0
N.D.
growth on oleic acid
YNB Oleic Acid
N.D.
-0.4
+0.1
-0.3
N.D.
growth on ypd
YPD
N.D.
-0.1
-0.2
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.6
+0.8
-0.7
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
+0.6
-0.9
N.D.
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.1
-0.2
+0.2
N.D.
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
+0.3
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
-0.3
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.2
+0.2
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.4
+0.2
+0.3
N.D.
auxotrophy
YNB Glucose
N.D.
-0.4
+0.4
+0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.1
+0.6
-0.3
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
+1.1
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.3
+0.6
+0.3
N.D.
auxotrophy
Dropout Complete
N.D.
-0.3
+0.9
+0.8
N.D.
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