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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14664 and 14665 are separated by 1029 nucleotides
14665 and 14666 are separated by 152 nucleotides
14666 and 14667 overlap by 11 nucleotides
14667 and 14668 are separated by 24 nucleotides
mRNA_6296: 14664 - Hypothetical Protein, at 466,865 to 468,121
14664
mRNA_6297: 14665 - K17970 MDV1, FIS2 mitochondrial division protein 1, at 469,151 to 471,840
14665
mRNA_6298: 14666 - K03842 ALG1 beta-1,4-mannosyltransferase, at 471,993 to 473,912
14666
mRNA_6299: 14667 - K14574 SDO1, SBDS ribosome maturation protein SDO1, at 473,902 to 475,228
14667
mRNA_6300: 14668 - Hypothetical Protein, at 475,253 to 476,197
14668
Group
Condition
mRNA
_6296
mRNA
_6297
mRNA
_6298
mRNA
_6299
mRNA
_6300
14664
14665
14666
14667
14668
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-1.0
N.D.
N.D.
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-0.9
N.D.
N.D.
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
+0.8
-0.7
N.D.
N.D.
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-1.0
N.D.
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.3
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.8
-0.1
N.D.
N.D.
+0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.3
N.D.
N.D.
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.3
N.D.
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.6
-0.3
N.D.
N.D.
-0.6
growth on ricinoleic acid
YNB Glucose
+0.3
-0.2
N.D.
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.3
N.D.
N.D.
+0.1
growth on ypd
YPD
-0.2
-0.2
N.D.
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
+0.1
N.D.
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
+0.3
N.D.
N.D.
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
-0.3
N.D.
N.D.
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.2
N.D.
N.D.
+0.5
auxotrophy
YNB Glucose
+0.4
+0.1
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.1
-0.3
N.D.
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.3
N.D.
N.D.
+0.4
auxotrophy
YNB Glucose 75mM Methionine
+0.6
+0.3
N.D.
N.D.
+0.4
auxotrophy
Dropout Complete
+0.9
+0.8
N.D.
N.D.
+0.3
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