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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14666 and 14667 overlap by 11 nucleotides
14667 and 14668 are separated by 24 nucleotides
14668 and 14669 are separated by 899 nucleotides
14669 and 14670 are separated by 412 nucleotides
mRNA_6298: 14666 - K03842 ALG1 beta-1,4-mannosyltransferase, at 471,993 to 473,912
14666
mRNA_6299: 14667 - K14574 SDO1, SBDS ribosome maturation protein SDO1, at 473,902 to 475,228
14667
mRNA_6300: 14668 - Hypothetical Protein, at 475,253 to 476,197
14668
mRNA_6301: 14669 - Hypothetical Protein, at 477,097 to 477,785
14669
mRNA_6302: 14670 - K12562 AMPH amphiphysin, at 478,198 to 480,170
14670
Group
Condition
mRNA
_6298
mRNA
_6299
mRNA
_6300
mRNA
_6301
mRNA
_6302
14666
14667
14668
14669
14670
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-1.0
+0.5
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.6
+0.4
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.7
+0.1
+0.2
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-0.2
+0.2
-0.3
auxotrophy
YNB Glucose
N.D.
N.D.
-0.1
+0.2
-0.2
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.1
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.2
+0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
-0.2
+0.6
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.3
+1.1
-0.7
growth on ypd
YPD
N.D.
N.D.
+0.5
-0.4
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.4
-0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.5
+0.2
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.1
+0.6
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.0
+0.3
+0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.4
+0.4
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.4
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
+0.7
+0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.4
+0.7
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.2
+0.6
+0.4
auxotrophy
Dropout Complete
N.D.
N.D.
+0.3
+1.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.5
+1.2
+0.0
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