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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14670 and 14671 are separated by 257 nucleotides
14671 and 14672 are separated by 314 nucleotides
14672 and 14673 are separated by 1372 nucleotides
14673 and 14674 are separated by 1162 nucleotides
mRNA_6302: 14670 - K12562 AMPH amphiphysin, at 478,198 to 480,170
14670
mRNA_6303: 14671 - HMMPfam-Uncharacterised protein family UPF0052-PF01933,SUPERFAMILY--SSF142338, at 480,428 to 482,328
14671
mRNA_6304: 14672 - Hypothetical Protein, at 482,643 to 484,084
14672
mRNA_6305: 14673 - HMMPfam-FAM72 protein-PF14976,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028, at 485,457 to 486,370
14673
mRNA_6306: 14674 - K05727 DOCK3 dedicator of cytokinesis protein 3, at 487,533 to 494,216
14674
Group
Condition
mRNA
_6302
mRNA
_6303
mRNA
_6304
mRNA
_6305
mRNA
_6306
14670
14671
14672
14673
14674
facs on lipid accumulation
Sorted High BODIPY Gate
-0.7
-0.2
-0.3
-0.6
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.2
+0.1
-2.2
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.5
+0.3
-0.9
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.3
+0.2
-0.8
+0.1
growth on ricinoleic acid
YNB Glucose
-0.3
+0.1
+0.2
-0.5
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
+0.2
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.4
-0.4
+0.3
-0.4
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.2
-0.3
+0.5
-0.2
growth on ypd
YPD
+0.2
-0.1
+0.4
-0.5
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.0
+0.6
-0.2
-0.2
auxotrophy
Dropout Complete
-0.2
+0.1
+0.3
+0.7
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.4
+0.1
+0.5
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
+0.5
+0.3
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.1
+0.5
-0.1
+0.0
growth on oleic acid
YNB Glucose
-0.1
+0.1
+0.5
+0.5
-0.2
auxotrophy
YNB Glucose
-0.2
+0.1
+0.8
+0.3
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
+0.5
+0.0
+0.5
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
+0.2
+0.5
+0.5
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.1
-0.0
+1.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
+1.0
+0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.4
+0.8
+0.8
+0.0
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