Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14671 and 14672 are separated by 314 nucleotides14672 and 14673 are separated by 1372 nucleotides14673 and 14674 are separated by 1162 nucleotides14674 and 14675 are separated by 284 nucleotides mRNA_6303: 14671 - HMMPfam-Uncharacterised protein family UPF0052-PF01933,SUPERFAMILY--SSF142338, at 480,428 to 482,328 14671 mRNA_6304: 14672 - Hypothetical Protein, at 482,643 to 484,084 14672 mRNA_6305: 14673 - HMMPfam-FAM72 protein-PF14976,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028, at 485,457 to 486,370 14673 mRNA_6306: 14674 - K05727 DOCK3 dedicator of cytokinesis protein 3, at 487,533 to 494,216 14674 mRNA_6307: 14675 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 494,501 to 498,811 14675
Group Condition mRNA_6303 mRNA_6304 mRNA_6305 mRNA_6306 mRNA_6307
14671 14672 14673 14674 14675
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 -0.6 -0.6 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.1 -2.2 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.3 -0.9 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.2 -0.8 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.3 -0.4 -0.0 +0.3
growth on ricinoleic acid YNB Glucose +0.1 +0.2 -0.5 +0.0 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.2 +0.0 -0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.3 +0.5 -0.2 -0.1
growth on ypd YPD -0.1 +0.4 -0.5 +0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.6 -0.2 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy +0.4 +0.1 +0.5 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.0 +1.0 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.5 +0.3 -0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.5 -0.1 +0.0 +0.2
growth on oleic acid YNB Glucose +0.1 +0.5 +0.5 -0.2 -0.0
auxotrophy Dropout Complete +0.1 +0.3 +0.7 -0.2 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 +0.0 +0.5 +0.1 +0.1
auxotrophy YNB Glucose +0.1 +0.8 +0.3 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 +1.0 +0.5 -0.1 -0.1
growth on oleic acid YNB Oleic Acid +0.2 +0.5 +0.5 -0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.8 +0.8 +0.0 +0.1
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