Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14672 and 14673 are separated by 1372 nucleotides14673 and 14674 are separated by 1162 nucleotides14674 and 14675 are separated by 284 nucleotides14675 and 14676 are separated by 939 nucleotides mRNA_6304: 14672 - Hypothetical Protein, at 482,643 to 484,084 14672 mRNA_6305: 14673 - HMMPfam-FAM72 protein-PF14976,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028, at 485,457 to 486,370 14673 mRNA_6306: 14674 - K05727 DOCK3 dedicator of cytokinesis protein 3, at 487,533 to 494,216 14674 mRNA_6307: 14675 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 494,501 to 498,811 14675 mRNA_6308: 14676 - K09326 OTX1 homeobox protein OTX1, at 499,751 to 502,382 14676
Group Condition mRNA_6304 mRNA_6305 mRNA_6306 mRNA_6307 mRNA_6308
14672 14673 14674 14675 14676
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.6 -0.6 -0.2 -1.6
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.8 +0.1 +0.2 -1.0
growth on ricinoleic acid YNB Glucose +0.2 -0.5 +0.0 +0.1 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.9 -0.1 -0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.2 -0.2 +0.0 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -2.2 +0.1 +0.4 +1.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.5 -0.2 -0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.5 -0.2 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 -0.2 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.4 -0.0 +0.3 +0.3
growth on oleic acid YNB Glucose +0.5 +0.5 -0.2 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +1.0 -0.2 -0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.5 +0.1 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.3 -0.2 +0.0 +0.0
auxotrophy Dropout Complete +0.3 +0.7 -0.2 +0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine +1.0 +0.5 -0.1 -0.1 -0.4
growth on ypd YPD +0.4 -0.5 +0.1 +0.4 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 -0.1 +0.0 +0.2 +0.3
auxotrophy YNB Glucose +0.8 +0.3 -0.1 +0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.5 +0.5 -0.0 +0.3 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.8 +0.8 +0.0 +0.1 +0.1
remove
mRNA_6304
plot
remove
mRNA_6305
plot
remove
mRNA_6306
remove
mRNA_6307
plot
remove
mRNA_6308
plot