Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14678 and 14679 are separated by 94 nucleotides14679 and 14680 are separated by 466 nucleotides14680 and 14681 are separated by 425 nucleotides14681 and 14682 are separated by 378 nucleotides mRNA_6310: 14678 - Hypothetical Protein, at 504,163 to 504,987 14678 mRNA_6311: 14679 - K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7, at 505,082 to 507,881 14679 mRNA_6312: 14680 - K10754 RFC1 replication factor C subunit 1, at 508,348 to 511,991 14680 mRNA_6313: 14681 - K10592 HUWE1, MULE, ARF-BP1 E3 ubiquitin-protein ligase HUWE1, at 512,417 to 524,941 14681 mRNA_6314: 14682 - K11426 SMYD SET and MYND domain-containing protein, at 525,320 to 527,665 14682
Group Condition mRNA_6310 mRNA_6311 mRNA_6312 mRNA_6313 mRNA_6314
14678 14679 14680 14681 14682
growth on ricinoleic acid YNB Ricinoleic Acid -3.6 +0.3 N.D. N.D. -0.0
facs on lipid accumulation Sorted High BODIPY Gate -3.1 -0.2 N.D. N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -2.7 +0.9 N.D. N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -1.8 -0.3 N.D. N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.6 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.1 -0.1 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.4 N.D. N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -1.5 +0.5 N.D. N.D. -0.2
growth on oleic acid YNB Glucose -0.6 -0.3 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.4 N.D. N.D. -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.3 N.D. N.D. -0.2
growth on ypd YPD -0.7 -0.0 N.D. N.D. +0.4
growth on oleic acid YNB Oleic Acid -0.5 +0.1 N.D. N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.3 N.D. N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.2 N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 N.D. N.D. +0.1
auxotrophy Dropout Complete +0.2 +0.3 N.D. N.D. -0.0
growth on ricinoleic acid YNB Glucose +0.1 +0.3 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.0 -0.1 N.D. N.D. -0.1
auxotrophy YNB Glucose +0.8 +0.2 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Arginine +0.9 -0.1 N.D. N.D. +0.4
remove
mRNA_6310
plot
remove
mRNA_6311
plot
remove
mRNA_6312
remove
mRNA_6313
plot
remove
mRNA_6314
plot