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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14682 and 14683 are separated by 549 nucleotides
14683 and 14684 are separated by 243 nucleotides
14684 and 14685 are separated by 338 nucleotides
14685 and 14686 are separated by 487 nucleotides
mRNA_6314: 14682 - K11426 SMYD SET and MYND domain-containing protein, at 525,320 to 527,665
14682
mRNA_6315: 14683 - K10609 CUL4 cullin 4, at 528,215 to 531,333
14683
mRNA_6316: 14684 - Hypothetical Protein, at 531,577 to 532,542
14684
mRNA_6317: 14685 - K11649 SMARCC SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C, at 532,881 to 534,866
14685
mRNA_6318: 14686 - Hypothetical Protein, at 535,354 to 538,435
14686
Group
Condition
mRNA
_6314
mRNA
_6315
mRNA
_6316
mRNA
_6317
mRNA
_6318
14682
14683
14684
14685
14686
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-1.4
-0.3
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.7
+0.1
N.D.
-0.4
growth on ricinoleic acid
YNB Glucose
-0.0
-1.1
+0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.6
+0.0
N.D.
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.7
-0.3
N.D.
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-1.2
+0.2
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-1.1
+0.2
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.4
-1.0
+0.1
N.D.
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.6
-0.0
N.D.
-0.5
auxotrophy
YNB Glucose
+0.1
-0.9
+0.1
N.D.
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.0
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.6
-0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.2
+0.1
N.D.
-0.2
auxotrophy
Dropout Complete
-0.0
-0.3
+0.3
N.D.
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.5
+0.2
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.2
+0.2
N.D.
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.4
+0.2
N.D.
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.2
-0.1
N.D.
+0.3
growth on oleic acid
YNB Oleic Acid
+0.1
+0.1
+0.1
N.D.
-0.1
growth on oleic acid
YNB Glucose
+0.1
+0.2
+0.2
N.D.
+0.2
growth on ypd
YPD
+0.4
+0.5
+0.3
N.D.
+0.4
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