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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14685 and 14686 are separated by 487 nucleotides
14686 and 14687 are separated by 507 nucleotides
14687 and 14688 overlap by 42 nucleotides
14688 and 14689 are separated by 684 nucleotides
mRNA_6317: 14685 - K11649 SMARCC SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C, at 532,881 to 534,866
14685
mRNA_6318: 14686 - Hypothetical Protein, at 535,354 to 538,435
14686
mRNA_6319: 14687 - KOG1729 FYVE finger containing protein, at 538,943 to 540,662
14687
mRNA_6320: 14688 - Hypothetical Protein, at 540,621 to 541,463
14688
mRNA_6321: 14689 - Hypothetical Protein, at 542,148 to 544,178
14689
Group
Condition
mRNA
_6317
mRNA
_6318
mRNA
_6319
mRNA
_6320
mRNA
_6321
14685
14686
14687
14688
14689
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.5
-0.4
-0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
-0.3
+0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
-0.5
-0.0
+0.4
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.3
-0.5
-0.1
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.0
-0.1
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.2
-0.2
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.4
+0.0
+0.1
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.3
-0.0
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.2
-0.1
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.1
+0.2
+0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.3
-0.0
-0.0
-0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.4
+0.3
+0.1
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
-0.1
-0.3
+0.0
+0.6
growth on ypd
YPD
N.D.
+0.4
-0.1
+0.1
+0.2
auxotrophy
Dropout Complete
N.D.
-0.1
+0.3
+0.1
+0.4
growth on oleic acid
YNB Glucose
N.D.
+0.2
+0.1
+0.0
+0.4
auxotrophy
YNB Glucose
N.D.
+0.1
+0.3
+0.1
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
-0.3
+0.0
+1.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.0
+0.6
+0.1
+0.4
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
+1.0
+0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
+0.2
+0.2
+0.1
+0.9
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