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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14694 and 14695 are separated by 154 nucleotides
14695 and 14696 are separated by 744 nucleotides
14696 and 14697 are separated by 358 nucleotides
14697 and 14698 are separated by 245 nucleotides
mRNA_6326: 14694 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 554,507 to 555,774
14694
mRNA_6327: 14695 - K13124 MORG1 mitogen-activated protein kinase organizer 1, at 555,929 to 557,274
14695
mRNA_6328: 14696 - Hypothetical Protein, at 558,019 to 558,735
14696
mRNA_6329: 14697 - BLAST clp1-like protein [Moniliophthora roreri MCA 2997], at 559,094 to 560,421
14697
mRNA_6330: 14698 - K03119 tauD taurine dioxygenase, at 560,667 to 562,112
14698
Group
Condition
mRNA
_6326
mRNA
_6327
mRNA
_6328
mRNA
_6329
mRNA
_6330
14694
14695
14696
14697
14698
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-1.7
-0.4
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.1
-0.1
-0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.6
-0.3
+0.1
+0.1
auxotrophy
Dropout Complete
-0.0
-0.5
+0.3
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
-0.3
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.3
-0.1
+0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.5
-0.3
+0.3
-0.0
auxotrophy
YNB Glucose
-0.2
-0.3
+0.0
+0.0
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.9
+0.3
-0.1
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.6
-0.2
+0.5
+0.0
+0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.0
+0.2
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.1
-0.1
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.1
+0.2
-0.1
+0.2
growth on ypd
YPD
+0.1
-0.0
-0.2
+0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.1
+0.3
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.2
+0.2
+0.1
-0.1
growth on oleic acid
YNB Glucose
-0.0
-0.3
+0.4
+0.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
+0.4
+0.1
+0.3
+0.1
growth on ricinoleic acid
YNB Glucose
-0.5
-0.1
+0.6
+0.2
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.4
+0.0
+0.2
+0.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
+0.4
+0.1
+0.1
+0.2
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