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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14695 and 14696 are separated by 744 nucleotides
14696 and 14697 are separated by 358 nucleotides
14697 and 14698 are separated by 245 nucleotides
14698 and 14699 are separated by 850 nucleotides
mRNA_6327: 14695 - K13124 MORG1 mitogen-activated protein kinase organizer 1, at 555,929 to 557,274
14695
mRNA_6328: 14696 - Hypothetical Protein, at 558,019 to 558,735
14696
mRNA_6329: 14697 - BLAST clp1-like protein [Moniliophthora roreri MCA 2997], at 559,094 to 560,421
14697
mRNA_6330: 14698 - K03119 tauD taurine dioxygenase, at 560,667 to 562,112
14698
mRNA_6331: 14699 - Hypothetical Protein, at 562,963 to 566,521
14699
Group
Condition
mRNA
_6327
mRNA
_6328
mRNA
_6329
mRNA
_6330
mRNA
_6331
14695
14696
14697
14698
14699
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.7
-0.4
+0.3
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
-0.3
+0.1
+0.1
-0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
+0.3
-0.1
+0.3
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.1
-0.0
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.1
+0.0
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
-0.3
+0.3
-0.0
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.3
+0.1
-0.2
+0.0
growth on ypd
YPD
-0.0
-0.2
+0.3
-0.1
-0.2
auxotrophy
Dropout Complete
-0.5
+0.3
-0.1
-0.2
+0.4
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.3
-0.1
+0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.5
+0.0
+0.1
-0.5
auxotrophy
YNB Glucose
-0.3
+0.0
+0.0
+0.3
-0.1
growth on oleic acid
YNB Glucose
-0.3
+0.4
+0.2
-0.0
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
+0.1
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.2
-0.1
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+0.2
+0.1
-0.1
-0.0
growth on oleic acid
YNB Oleic Acid
-0.0
+0.2
+0.1
-0.1
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.0
+0.2
+0.2
+0.1
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.1
+0.1
+0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
+0.1
+0.3
+0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.1
+0.6
+0.2
+0.3
-0.1
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