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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14699 and 14700 are separated by 268 nucleotides
14700 and 14701 are separated by 534 nucleotides
14701 and 14702 are separated by 292 nucleotides
14702 and 14703 are separated by 489 nucleotides
mRNA_6331: 14699 - Hypothetical Protein, at 562,963 to 566,521
14699
mRNA_6332: 14700 - KOG0725 Reductases with broad range of substrate specificities, at 566,790 to 568,565
14700
mRNA_6333: 14701 - K08852 ERN1 serine/threonine-protein kinase/endoribonuclease IRE1, at 569,100 to 573,400
14701
mRNA_6334: 14702 - Hypothetical Protein, at 573,693 to 575,624
14702
mRNA_6335: 14703 - BLAST chloride channel protein 3 [Pseudozyma hubeiensis..., at 576,114 to 577,521
14703
Group
Condition
mRNA
_6331
mRNA
_6332
mRNA
_6333
mRNA
_6334
mRNA
_6335
14699
14700
14701
14702
14703
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
-0.2
N.D.
-0.4
-0.9
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.7
N.D.
-0.9
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
+0.5
N.D.
-1.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.2
N.D.
+0.2
-0.7
growth on oleic acid
YNB Glucose
-0.3
+0.1
N.D.
-0.7
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.2
N.D.
-0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.4
N.D.
-0.5
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.5
N.D.
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.0
N.D.
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.0
N.D.
-0.4
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.3
N.D.
+0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
+0.2
N.D.
-0.2
-0.0
auxotrophy
YNB Glucose
-0.1
-0.1
N.D.
+0.3
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
+0.3
N.D.
-0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.2
N.D.
+0.4
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.1
N.D.
+0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.1
N.D.
+0.4
-0.1
growth on oleic acid
YNB Oleic Acid
+0.3
+0.2
N.D.
+0.3
-0.5
auxotrophy
Dropout Complete
+0.4
+0.2
N.D.
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.0
N.D.
+0.2
+0.4
growth on ypd
YPD
-0.2
+0.5
N.D.
+0.3
+0.1
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