Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 14709 and 14710 are separated by 257 nucleotides14710 and 14711 are separated by 390 nucleotides14711 and 14712 are separated by 582 nucleotides14712 and 14713 are separated by 286 nucleotides mRNA_6341: 14709 - K01867 WARS, trpS tryptophanyl-tRNA synthetase, at 587,053 to 588,639 14709 mRNA_6342: 14710 - KOG0756 Mitochondrial tricarboxylate/dicarboxylate carrier proteins, at 588,897 to 590,459 14710 mRNA_6343: 14711 - K12621 LSM2 U6 snRNA-associated Sm-like protein LSm2, at 590,850 to 591,445 14711 mRNA_6344: 14712 - KOG3525 Subtilisin-like proprotein convertase, at 592,028 to 595,751 14712 mRNA_6345: 14713 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 596,038 to 599,020 14713
Group Condition mRNA_6341 mRNA_6342 mRNA_6343 mRNA_6344 mRNA_6345
14709 14710 14711 14712 14713
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 N.D. -0.4 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 N.D. -0.3 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 N.D. -0.3 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.7 N.D. -0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 N.D. -0.2 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 N.D. -0.3 -0.7
growth on oleic acid YNB Oleic Acid N.D. -0.5 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 N.D. -0.1 -0.3
growth on oleic acid YNB Glucose N.D. -0.4 N.D. -0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 N.D. +0.0 -0.5
growth on ypd YPD N.D. -0.5 N.D. -0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 N.D. +0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 N.D. +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 N.D. -0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 N.D. +0.2 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 N.D. +0.2 +0.5
auxotrophy Dropout Complete N.D. -0.0 N.D. +0.2 +0.3
auxotrophy YNB Glucose N.D. -0.2 N.D. +0.3 +0.4
growth on ricinoleic acid YNB Glucose N.D. -0.1 N.D. +0.3 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 N.D. +0.5 +0.6
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