Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14711 and 14712 are separated by 582 nucleotides14712 and 14713 are separated by 286 nucleotides14713 and 14714 are separated by 656 nucleotides14714 and 14715 are separated by 576 nucleotides mRNA_6343: 14711 - K12621 LSM2 U6 snRNA-associated Sm-like protein LSm2, at 590,850 to 591,445 14711 mRNA_6344: 14712 - KOG3525 Subtilisin-like proprotein convertase, at 592,028 to 595,751 14712 mRNA_6345: 14713 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 596,038 to 599,020 14713 mRNA_6346: 14714 - HMMPfam-Protein of unknown function (DUF938)-PF06080,SUPERFAMILY--SSF53335, at 599,677 to 600,627 14714 mRNA_6347: 14715 - Hypothetical Protein, at 601,204 to 601,756 14715
Group Condition mRNA_6343 mRNA_6344 mRNA_6345 mRNA_6346 mRNA_6347
14711 14712 14713 14714 14715
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 +0.5 -1.0 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.4 -0.5 -0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.3 -0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.1 -0.2 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 +0.1 -0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.3 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.0 -0.5 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 -0.7 +0.0 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 -0.4 -0.1 +0.5
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 -0.6 +0.1 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 -0.3 -0.1 +0.6
growth on oleic acid YNB Glucose N.D. -0.2 -0.1 +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.1 -0.3 +0.3
growth on ricinoleic acid YNB Glucose N.D. +0.3 +0.4 -0.2 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.1 +0.2 +0.9
growth on ypd YPD N.D. -0.0 +0.3 +0.2 +0.6
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +0.4 +0.5 +0.3
auxotrophy YNB Glucose N.D. +0.3 +0.4 +0.4 +0.6
auxotrophy Dropout Complete N.D. +0.2 +0.3 +0.9 +0.6
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 +0.6 +0.8 +0.5
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