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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
14720 and 14721 are separated by 1042 nucleotides
14721 and 14722 are separated by 234 nucleotides
14722 and 14723 are separated by 529 nucleotides
14723 and 14724 are separated by 185 nucleotides
mRNA_6352: 14720 - K02980 RP-S29e, RPS29 small subunit ribosomal protein S29e, at 614,415 to 614,996
14720
mRNA_6353: 14721 - KOG4660 Protein Mei2, essential for commitment to meiosis, and related proteins, at 616,039 to 616,629
14721
mRNA_6354: 14722 - BLAST Mei2p [Pneumocystis carinii], at 616,864 to 619,118
14722
mRNA_6355: 14723 - KOG4532 WD40-like repeat containing protein, at 619,648 to 622,272
14723
mRNA_6356: 14724 - K01477 alc, ALLC allantoicase, at 622,458 to 625,058
14724
Group
Condition
mRNA
_6352
mRNA
_6353
mRNA
_6354
mRNA
_6355
mRNA
_6356
14720
14721
14722
14723
14724
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.2
+0.0
-4.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.1
-0.1
-3.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.2
+0.1
-2.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.1
-0.6
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.0
-0.1
-0.8
auxotrophy
Dropout Complete
N.D.
N.D.
-0.2
-0.2
-0.4
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.2
-0.0
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.5
-0.1
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.0
+0.1
-0.6
auxotrophy
YNB Glucose
N.D.
N.D.
-0.1
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-1.0
+0.4
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
-0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
-0.0
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.2
+0.4
-0.4
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.1
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.3
+0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
-0.0
-0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.3
+0.2
+0.5
growth on ypd
YPD
N.D.
N.D.
+1.0
-0.2
+0.1
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