Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 14725 and 14726 are separated by 482 nucleotides14726 and 14727 are separated by 1414 nucleotides14727 and 14728 are separated by 661 nucleotides14728 and 14729 are separated by 763 nucleotides mRNA_6357: 14725 - HMMPfam-Ribonuclease-III-like-PF14622,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 625,367 to 626,592 14725 mRNA_6358: 14726 - KOG1674 Cyclin, at 627,075 to 629,360 14726 mRNA_6359: 14727 - KOG1812 Predicted E3 ubiquitin ligase, at 630,775 to 633,081 14727 mRNA_6360: 14728 - K17790 TIM22 mitochondrial import inner membrane translocase subunit TIM22, at 633,743 to 634,504 14728 mRNA_6361: 14729 - K08832 SRPK3, STK23 serine/threonine-protein kinase SRPK3, at 635,268 to 638,035 14729
Group Condition mRNA_6357 mRNA_6358 mRNA_6359 mRNA_6360 mRNA_6361
14725 14726 14727 14728 14729
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.0 -0.0 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.7 -0.3 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.2 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.0 N.D. N.D.
growth on oleic acid YNB Glucose N.D. -0.3 +0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.3 +0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 -0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 -0.2 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.1 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 +0.2 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.0 +0.1 N.D. N.D.
auxotrophy Dropout Complete N.D. +0.0 +0.3 N.D. N.D.
growth on ypd YPD N.D. +0.3 +0.1 N.D. N.D.
auxotrophy YNB Glucose N.D. +0.1 +0.3 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 +0.4 N.D. N.D.
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