Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 14727 and 14728 are separated by 661 nucleotides14728 and 14729 are separated by 763 nucleotides14729 and 14730 are separated by 559 nucleotides14730 and 14731 are separated by 66 nucleotides mRNA_6359: 14727 - KOG1812 Predicted E3 ubiquitin ligase, at 630,775 to 633,081 14727 mRNA_6360: 14728 - K17790 TIM22 mitochondrial import inner membrane translocase subunit TIM22, at 633,743 to 634,504 14728 mRNA_6361: 14729 - K08832 SRPK3, STK23 serine/threonine-protein kinase SRPK3, at 635,268 to 638,035 14729 mRNA_6362: 14730 - SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665, at 638,595 to 641,031 14730 mRNA_6363: 14731 - K14553 UTP18 U3 small nucleolar RNA-associated protein 18, at 641,098 to 643,745 14731
Group Condition mRNA_6359 mRNA_6360 mRNA_6361 mRNA_6362 mRNA_6363
14727 14728 14729 14730 14731
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. N.D. -0.4 -1.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. N.D. -0.6 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. N.D. +0.1 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. N.D. -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. N.D. -0.3 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. N.D. +0.1 -0.3
auxotrophy Dropout Complete +0.3 N.D. N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 N.D. N.D. -0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. +0.2 -0.3
growth on ypd YPD +0.1 N.D. N.D. +0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 N.D. N.D. +0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 N.D. N.D. +0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 N.D. N.D. +0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. N.D. +0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. N.D. +0.1 +0.4
growth on ricinoleic acid YNB Glucose +0.0 N.D. N.D. +0.2 +0.2
growth on oleic acid YNB Glucose +0.2 N.D. N.D. -0.2 +0.5
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. N.D. -0.1 +0.4
auxotrophy YNB Glucose +0.3 N.D. N.D. +0.3 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. N.D. +0.5 +0.5
remove
mRNA_6359
plot		 remove
mRNA_6360
plot		 remove
mRNA_6361		 remove
mRNA_6362
plot		 remove
mRNA_6363
plot